Programme

FRIDAY, 3 July
08:30Course RegistrationFoyer, ICGEB, W Building
09:15Welcome AddressSeminar Room, ICGEB
Sándor Pongor, ICGEB, Trieste, Italy
09:30The ICGEB computer system – practicalsInformatics Laboratory, L2 Building
Kristian Vlahovicek, ICGEB, Trieste, Italy
Maria Verina, SpringFirm,Trieste, Italy
11:00BREAK
11:30Introduction to algorithms in bioinformaticsSándor Pongor
13:30LUNCHCafeteria, Ground Floor, Building C
14:30Database searching, GCG package — practicalsDavid Judge, University of Cambridge, UK
Jack Leunissen, University of Nijmegen,The Netherlands
18:00BUS TO HOTEL
SATURDAY, 4 July
09:00Database searching, GCG package — practicals (cont.)David Judge, Jack Leunissen
13:30GET-TOGETHERStaff Common Room, ICGEB, W Building
14:30Database searching, GCG package — practicals (cont.)David Judge, Jack Leunissen
18:00BUS TO HOTEL
MONDAY, 6 July
09:00Database searching, GCG package — practicals (cont.)David Judge, Jack Leunissen
11:00BREAK
11:30Database searching, GCG package — practicals (cont.)David Judge, Jack Leunissen
13:30LUNCH
14:30Database searching, GCG package — practicals (cont.)David Judge, Jack Leunissen
18:00BUS TO HOTEL
TUESDAY, 7 July
09:00GCG packageDavid Judge, Jack Leunissen
11:00BREAK
11:30GCG package (cont.)David Judge, Jack Leunissen
13:30LUNCH
14:30Protein sequence databases (to be confirmed)Amos Bairoch, University of Geneva,Switzerland
18:00BUS TO HOTEL
WEDNESDAY, 8 July
09:00Rapid database searches on the Bioccelerator: The evolvement of sequence analysis algorithmsLeon Estermann, Weizmann Institute, Rehovot,Israel
Ari Manor, CompugenLtd., Petach-Tikva, Israel
09:30Framesearch, Profilesearch, Frame+, Proframesearch
10:30BREAK
11:00HMM & GeneWise algorithms
12:00Demonstration on GenWeb &the Bioccelerator and the XL/P on the Weizmann servers
12:30Principles of hardware acceleration
13:30LUNCH
14:30NCBI services, nucleic acid databasesDavid Landsman, NIH/NLM/NCBI, Bethesda, MD, USA
18:00BUS TO HOTEL
THURSDAY, 9 July
09:00WWW servers, EBI serversRobert Harper, EMBL-EBI,Cambridge, UK
11:00BREAK
11:30WWW servers, EBI servers (cont.)Robert Harper, EMBL-EBI,Cambridge, UK
13:30LUNCH
14:30WWW servers, EBI servers (cont.)Robert Harper, EMBL-EBI,Cambridge, UK
18:00BUS TO HOTEL
FRIDAY, 10 July
09:00Genome computingMartin Bishop, UK HGMP ResearchCentre, Cambridge, UK
David Judge, University of Cambridge, UK
11:00BREAK
11:30Genome computing (cont.)Martin Bishop, UK HGMP ResearchCentre, Cambridge, UK
David Judge, University of Cambridge, UK
13:30LUNCH
14:30Genome computing (cont.)Martin Bishop, UK HGMP ResearchCentre, Cambridge, UK
David Judge, University of Cambridge, UK
18:00BUS TO HOTEL